Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALFI_RS08610 | Not Available | Positive | 1967582 - 1968052 | 16966.4 |
| hypothetical protein | ALFI_RS08615 | Not Available | Positive | 1968158 - 1968397 | 8074.51 |
| flavodoxin family protein | ALFI_RS08620 | Not Available | Positive | 1968711 - 1969322 | 21975.6 |
| putative dna modification/repair radical sam protein | ALFI_RS08625 | Not Available | Positive | 1969526 - 1970785 | 47924.8 |
| tigr03915 family putative dna repair protein | ALFI_RS08630 | Not Available | Positive | 1970791 - 1971552 | 30140.1 |
| Trna-ser | Not Available | Not Available | Positive | 1971640 - 1971730 | Not Available |
| bama/tama family outer membrane protein | ALFI_RS08640 | Not Available | Negative | 1971888 - 1974191 | 86586.0 |
| translocation/assembly module tamb domain-containing protein | ALFI_RS08645 | Not Available | Negative | 1974175 - 1979049 | 174643.0 |
| dna polymerase iv | ALFI_RS08650 | Not Available | Negative | 1979255 - 1980331 | 40318.4 |
| nitroreductase family protein | ALFI_RS08655 | Not Available | Positive | 1980422 - 1981063 | 23687.0 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
