Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triose-phosphate isomerase | ALFI_RS08560 | Not Available | Negative | 1956677 - 1957435 | 26821.1 |
| lysine--trna ligase | ALFI_RS08565 | Not Available | Negative | 1957479 - 1959200 | 65656.7 |
| phosphatase pap2 family protein | ALFI_RS08570 | Not Available | Negative | 1959411 - 1960058 | 23703.5 |
| mboat family o-acyltransferase | ALFI_RS08575 | Not Available | Negative | 1960204 - 1961709 | 57108.8 |
| hypothetical protein | ALFI_RS08580 | Not Available | Negative | 1961706 - 1963313 | 58979.0 |
| zinc metallopeptidase | ALFI_RS08585 | Not Available | Negative | 1963321 - 1964088 | 27498.6 |
| sdr family nad(p)-dependent oxidoreductase | ALFI_RS08590 | Not Available | Negative | 1964092 - 1964841 | 26927.1 |
| abc transporter permease | ALFI_RS08595 | Not Available | Positive | 1964918 - 1966162 | 45237.2 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | ALFI_RS08600 | Not Available | Positive | 1966159 - 1966875 | 27040.0 |
| hypothetical protein | ALFI_RS08605 | Not Available | Positive | 1966878 - 1967582 | 25129.7 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
