Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent rrna methyltransferase | ALFI_RS00595 | Not Available | Positive | 135508 - 136707 | 44579.1 |
| winged helix-turn-helix transcriptional regulator | ALFI_RS00600 | Not Available | Positive | 136709 - 137086 | 14082.0 |
| hypothetical protein | ALFI_RS00605 | Not Available | Negative | 137303 - 138157 | 32061.0 |
| membrane protein insertase yidc | ALFI_RS00610 | Not Available | Negative | 138351 - 140321 | 74106.5 |
| ctp synthase | ALFI_RS00615 | Not Available | Negative | 140355 - 141977 | 59641.1 |
| duf349 domain-containing protein | ALFI_RS00620 | Not Available | Negative | 141989 - 144346 | 88064.0 |
| response regulator transcription factor | ALFI_RS00625 | Not Available | Positive | 144523 - 145191 | 25018.5 |
| glutamate 5-kinase | ALFI_RS00630 | Not Available | Positive | 145220 - 146311 | 39422.3 |
| glutamate-5-semialdehyde dehydrogenase | ALFI_RS00635 | Not Available | Positive | 146319 - 147569 | 44985.7 |
| fluoride efflux transporter crcb | ALFI_RS00640 | Not Available | Positive | 147677 - 148048 | 12591.6 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
