Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p | ALFI_RS08160 | Not Available | Positive | 1877517 - 1878083 | 21209.3 |
| hypothetical protein | ALFI_RS08165 | Not Available | Negative | 1878182 - 1879081 | 33119.0 |
| ragb/susd family nutrient uptake outer membrane protein | ALFI_RS08170 | Not Available | Negative | 1879093 - 1880577 | 55945.5 |
| hypothetical protein | ALFI_RS17695 | Not Available | Negative | 1880590 - 1880937 | 13762.3 |
| susc/raga family tonb-linked outer membrane protein | ALFI_RS08175 | Not Available | Negative | 1881116 - 1883716 | 95198.9 |
| multidrug dmt transporter permease | ALFI_RS08180 | Not Available | Negative | 1883739 - 1885074 | 50835.6 |
| glycoside hydrolase family 2 protein | ALFI_RS08185 | Not Available | Negative | 1885094 - 1887055 | 74763.0 |
| glycosyl hydrolase 2 galactose-binding domain-containing protein | ALFI_RS17700 | Not Available | Negative | 1887025 - 1887636 | 23089.2 |
| suse domain-containing protein | ALFI_RS08190 | Not Available | Negative | 1887666 - 1888871 | 44052.1 |
| glycoside hydrolase family 97 protein | ALFI_RS08200 | Not Available | Positive | 1889244 - 1891250 | 75279.8 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
