Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| simpl domain-containing protein | ALFI_RS07955 | Not Available | Positive | 1829519 - 1830205 | 25183.4 |
| cytidine deaminase | ALFI_RS07960 | Not Available | Positive | 1830443 - 1830898 | 16609.7 |
| rlua family pseudouridine synthase | ALFI_RS07965 | Not Available | Positive | 1831002 - 1831688 | 25734.8 |
| d-aminoacyl-trna deacylase | ALFI_RS07970 | Not Available | Positive | 1831702 - 1832157 | 16541.0 |
| dna/rna non-specific endonuclease | ALFI_RS07975 | Not Available | Positive | 1832172 - 1833695 | 54371.0 |
| tigr01212 family radical sam protein | ALFI_RS07980 | Not Available | Positive | 1833698 - 1834654 | 36290.3 |
| yitt family protein | ALFI_RS07985 | Not Available | Positive | 1834725 - 1835621 | 32556.0 |
| primosomal protein n' | ALFI_RS07990 | Not Available | Positive | 1835621 - 1837876 | 83834.1 |
| comf family protein | ALFI_RS07995 | Not Available | Positive | 1837860 - 1838582 | 26983.8 |
| replicative dna helicase | ALFI_RS08000 | Not Available | Positive | 1838747 - 1840312 | 57159.2 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
