Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | ALFI_RS00550 | Not Available | Positive | 126057 - 127268 | 43190.1 |
| hypothetical protein | ALFI_RS00555 | Not Available | Negative | 127342 - 128265 | 33494.9 |
| hypothetical protein | ALFI_RS17595 | Not Available | Negative | 128348 - 128476 | 5090.08 |
| mbl fold metallo-hydrolase | ALFI_RS00560 | Not Available | Positive | 128544 - 129266 | 26584.6 |
| heavy-metal-associated domain-containing protein | ALFI_RS00565 | Not Available | Negative | 129346 - 129657 | 11195.0 |
| tonb-dependent receptor | ALFI_RS00570 | Not Available | Negative | 129704 - 132034 | 87212.7 |
| hypothetical protein | ALFI_RS00575 | Not Available | Negative | 132100 - 132516 | 14547.6 |
| pqqd family protein | ALFI_RS00580 | Not Available | Negative | 132537 - 132803 | 9846.82 |
| atp-dependent dna helicase recq | ALFI_RS00585 | Not Available | Positive | 132878 - 134809 | 72769.8 |
| 3'-5' exonuclease | ALFI_RS00590 | Not Available | Positive | 134900 - 135511 | 22979.0 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
