Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | ALFI_RS07855 | Not Available | Negative | 1802883 - 1804175 | 48083.1 |
| tyrosine-type recombinase/integrase | ALFI_RS07860 | Not Available | Negative | 1804352 - 1805851 | 57403.0 |
| hypothetical protein | ALFI_RS07865 | Not Available | Negative | 1805985 - 1806290 | 11452.8 |
| susc/raga family tonb-linked outer membrane protein | ALFI_RS07870 | Not Available | Negative | 1806296 - 1809502 | 117833.0 |
| hybrid sensor histidine kinase/response regulator transcription factor | ALFI_RS07875 | Not Available | Positive | 1809759 - 1813646 | 146515.0 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | ALFI_RS07880 | Not Available | Positive | 1813799 - 1816138 | 85666.0 |
| Trna-leu | Not Available | Not Available | Positive | 1816252 - 1816339 | Not Available |
| s41 family peptidase | ALFI_RS07890 | Not Available | Negative | 1816549 - 1818072 | 55510.1 |
| s46 family peptidase | ALFI_RS07895 | Not Available | Negative | 1818112 - 1820100 | 74126.4 |
| maf family nucleotide pyrophosphatase | ALFI_RS07900 | Not Available | Negative | 1820100 - 1820693 | 21955.5 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
