Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | ALFI_RS07805 | Not Available | Negative | 1791897 - 1793381 | 56281.8 |
| helix-turn-helix domain-containing protein | ALFI_RS07810 | Not Available | Negative | 1793703 - 1794602 | 35571.7 |
| mbl fold metallo-hydrolase | ALFI_RS07815 | Not Available | Positive | 1794733 - 1795509 | 28940.1 |
| radical sam mobile pair protein b | ALFI_RS07820 | Not Available | Positive | 1795742 - 1796617 | 34030.1 |
| helix-turn-helix domain-containing protein | ALFI_RS07825 | Not Available | Negative | 1796620 - 1796820 | 7949.89 |
| mobilization protein | ALFI_RS07830 | Not Available | Negative | 1796942 - 1798471 | 57934.1 |
| toprim domain-containing protein | ALFI_RS07835 | Not Available | Negative | 1798803 - 1799666 | 32654.5 |
| multidrug dmt transporter permease | ALFI_RS07840 | Not Available | Negative | 1799840 - 1801034 | 42278.5 |
| helix-turn-helix transcriptional regulator | ALFI_RS07845 | Not Available | Negative | 1801048 - 1801353 | 11649.1 |
| duf6043 family protein | ALFI_RS07850 | Not Available | Negative | 1801495 - 1802859 | 52211.9 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
