Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacon domain-containing protein | ALFI_RS07755 | Not Available | Negative | 1772557 - 1774590 | 73853.6 |
| duf4984 domain-containing protein | ALFI_RS07760 | Not Available | Negative | 1774620 - 1775564 | 35631.5 |
| ragb/susd family nutrient uptake outer membrane protein | ALFI_RS07765 | Not Available | Negative | 1775588 - 1777138 | 59361.8 |
| susc/raga family tonb-linked outer membrane protein | ALFI_RS07770 | Not Available | Negative | 1777148 - 1780099 | 109043.0 |
| duf4091 domain-containing protein | ALFI_RS07775 | Not Available | Positive | 1780926 - 1782698 | 66143.3 |
| multidrug dmt transporter permease | ALFI_RS07780 | Not Available | Negative | 1782973 - 1785258 | 87082.4 |
| glycoside hydrolase family 5 protein | ALFI_RS07785 | Not Available | Negative | 1785293 - 1786294 | 37902.5 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | ALFI_RS07790 | Not Available | Negative | 1786300 - 1788600 | 84758.7 |
| gh92 family glycosyl hydrolase | ALFI_RS07795 | Not Available | Negative | 1788597 - 1791503 | 107990.0 |
| pkd-like domain-containing protein | ALFI_RS07800 | Not Available | Negative | 1791513 - 1791878 | 13399.9 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
