Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-f family atp-binding cassette domain-containing protein | ALFI_RS07705 | Not Available | Negative | 1758118 - 1759989 | 70848.2 |
| dhh family phosphoesterase | ALFI_RS07710 | Not Available | Positive | 1760183 - 1761214 | 38277.8 |
| lysr family transcriptional regulator | ALFI_RS07715 | Not Available | Positive | 1761694 - 1762581 | 32585.6 |
| yeih family protein | ALFI_RS07720 | Not Available | Positive | 1762912 - 1763979 | 37897.7 |
| gnat family n-acetyltransferase | ALFI_RS07725 | Not Available | Negative | 1764004 - 1764573 | 22025.0 |
| lipocalin family protein | ALFI_RS07730 | Not Available | Negative | 1764783 - 1765244 | 17157.2 |
| duf1573 domain-containing protein | ALFI_RS07735 | Not Available | Negative | 1765268 - 1766083 | 29171.2 |
| s8 family peptidase | ALFI_RS07740 | Not Available | Negative | 1766094 - 1768148 | 73779.5 |
| bacon domain-containing protein | ALFI_RS07745 | Not Available | Negative | 1768151 - 1769800 | 62483.7 |
| duf4458 domain-containing protein | ALFI_RS07750 | Not Available | Negative | 1769814 - 1772462 | 99830.1 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
