Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | ALFI_RS07650 | Not Available | Negative | 1746570 - 1747592 | 38318.8 |
| vwa domain-containing protein | ALFI_RS07655 | Not Available | Negative | 1747606 - 1748598 | 36109.9 |
| tetratricopeptide repeat protein | ALFI_RS07660 | Not Available | Negative | 1748611 - 1749399 | 29932.9 |
| hypothetical protein | ALFI_RS07665 | Not Available | Negative | 1749404 - 1750384 | 36928.4 |
| duf58 domain-containing protein | ALFI_RS07670 | Not Available | Negative | 1750381 - 1751265 | 33681.4 |
| aaa family atpase | ALFI_RS07675 | Not Available | Negative | 1751268 - 1752266 | 37023.0 |
| atp-dependent helicase | ALFI_RS07680 | Not Available | Positive | 1752554 - 1755118 | 96012.0 |
| glycosyltransferase | ALFI_RS07685 | Not Available | Positive | 1755124 - 1756065 | 36465.5 |
| endonuclease iii | ALFI_RS07690 | Not Available | Positive | 1756062 - 1756715 | 24211.4 |
| duf4886 domain-containing protein | ALFI_RS07695 | Not Available | Positive | 1756750 - 1757526 | 29277.3 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
