Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | ALFI_RS07610 | Not Available | Positive | 1730291 - 1730887 | 23423.4 |
| hypothetical protein | ALFI_RS17410 | Not Available | Positive | 1730975 - 1731385 | 14802.0 |
| multidrug dmt transporter permease | ALFI_RS17600 | Not Available | Positive | 1731398 - 1731598 | 7688.98 |
| duf4974 domain-containing protein | ALFI_RS17605 | Not Available | Positive | 1731692 - 1731976 | 11252.3 |
| susc/raga family tonb-linked outer membrane protein | ALFI_RS07620 | Not Available | Positive | 1732103 - 1735468 | 123514.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | ALFI_RS07625 | Not Available | Positive | 1735482 - 1737092 | 59785.1 |
| glycoside hydrolase family 18 | ALFI_RS07630 | Not Available | Positive | 1737120 - 1739030 | 70196.1 |
| duf1735 and lamg domain-containing protein | ALFI_RS07635 | Not Available | Positive | 1739061 - 1740218 | 41978.6 |
| family 20 glycosylhydrolase | ALFI_RS07640 | Not Available | Positive | 1740460 - 1742520 | 76966.1 |
| pl29 family lyase n-terminal domain-containing protein | ALFI_RS07645 | Not Available | Negative | 1742612 - 1746238 | 130454.0 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
