Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinolinate synthase nada | ALFI_RS07305 | Not Available | Negative | 1660048 - 1660989 | 34614.9 |
| mrp/nbp35 family atp-binding protein | ALFI_RS07310 | Not Available | Negative | 1661367 - 1662419 | 38081.2 |
| signal peptide peptidase sppa | ALFI_RS07315 | Not Available | Positive | 1662596 - 1664374 | 64140.2 |
| arac family transcriptional regulator | ALFI_RS07320 | Not Available | Negative | 1664491 - 1665480 | 37336.3 |
| leucine-rich repeat protein | ALFI_RS07325 | Not Available | Negative | 1665699 - 1668227 | 89774.9 |
| 6-pyruvoyl trahydropterin synthase family protein | ALFI_RS07330 | Not Available | Positive | 1668653 - 1669105 | 17042.4 |
| dna polymerase i | ALFI_RS07335 | Not Available | Positive | 1669202 - 1672072 | 107458.0 |
| outer membrane beta-barrel protein | ALFI_RS07340 | Not Available | Negative | 1672226 - 1672858 | 23265.6 |
| duf4136 domain-containing protein | ALFI_RS07345 | Not Available | Negative | 1672883 - 1673524 | 24487.6 |
| is3 family transposase | ALFI_RS07350 | Not Available | Negative | 1673696 - 1674583 | 34767.5 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
