Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | ALFI_RS07210 | Not Available | Negative | 1630266 - 1631186 | 34542.7 |
| m13 family metallopeptidase | ALFI_RS07215 | Not Available | Negative | 1631432 - 1633462 | 75583.0 |
| phosphoglycerate kinase | ALFI_RS07220 | Not Available | Negative | 1633546 - 1634808 | 45228.6 |
| site-specific integrase | ALFI_RS07225 | Not Available | Positive | 1635140 - 1636360 | 46493.7 |
| hypothetical protein | ALFI_RS07230 | Not Available | Positive | 1636373 - 1636756 | 14209.1 |
| primase-helicase family protein | ALFI_RS07235 | Not Available | Positive | 1637034 - 1638275 | 48457.0 |
| toprim domain-containing protein | ALFI_RS07240 | Not Available | Positive | 1638527 - 1639498 | 37306.8 |
| mobv family relaxase | ALFI_RS07245 | Not Available | Positive | 1639765 - 1641072 | 50524.3 |
| hypothetical protein | ALFI_RS16535 | Not Available | Positive | 1641387 - 1641884 | 18037.9 |
| hypothetical protein | ALFI_RS07250 | Not Available | Positive | 1641904 - 1642563 | 25133.7 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
