Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine synthase b | ALFI_RS07160 | Not Available | Positive | 1615916 - 1617589 | 63043.0 |
| udp-glucose 4-epimerase gale | ALFI_RS07165 | Not Available | Negative | 1617771 - 1618799 | 37875.1 |
| alkaline phosphatase | ALFI_RS07170 | Not Available | Negative | 1619043 - 1620692 | 59427.0 |
| is110 family transposase | ALFI_RS07175 | Not Available | Positive | 1620910 - 1621878 | 35640.4 |
| glycine c-acetyltransferase | ALFI_RS07180 | Not Available | Positive | 1622331 - 1623518 | 43485.4 |
| lrp/asnc family transcriptional regulator | ALFI_RS07185 | Not Available | Positive | 1623532 - 1624005 | 17748.9 |
| hypothetical protein | ALFI_RS16910 | Not Available | Positive | 1624287 - 1624769 | 16977.2 |
| sigma-54-dependent transcriptional regulator | ALFI_RS07195 | Not Available | Negative | 1624784 - 1626124 | 49004.1 |
| hybrid sensor histidine kinase/response regulator | ALFI_RS07200 | Not Available | Negative | 1626127 - 1628724 | 93624.9 |
| abc transporter permease | ALFI_RS07205 | Not Available | Negative | 1628934 - 1630253 | 48722.6 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
