Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase large subunit | ALFI_RS07110 | Not Available | Positive | 1602604 - 1603980 | 49153.7 |
| 3-isopropylmalate dehydratase small subunit | ALFI_RS07115 | Not Available | Positive | 1603993 - 1604586 | 22167.9 |
| alpha-isopropylmalate synthase regulatory domain-containing protein | ALFI_RS07120 | Not Available | Positive | 1604597 - 1606138 | 57368.4 |
| 3-isopropylmalate dehydrogenase | ALFI_RS07125 | Not Available | Positive | 1606128 - 1607189 | 38493.0 |
| threonine synthase | ALFI_RS07130 | Not Available | Negative | 1607559 - 1608848 | 46391.7 |
| homoserine kinase | ALFI_RS07135 | Not Available | Negative | 1608864 - 1609790 | 31806.6 |
| dihydroxy-acid dehydratase | ALFI_RS07140 | Not Available | Positive | 1610585 - 1612405 | 65175.9 |
| biosynthetic-type acetolactate synthase large subunit | ALFI_RS07145 | Not Available | Positive | 1612423 - 1614150 | 61837.5 |
| acetolactate synthase small subunit | ALFI_RS07150 | Not Available | Positive | 1614164 - 1614706 | 20974.2 |
| ketol-acid reductoisomerase | ALFI_RS07155 | Not Available | Positive | 1614719 - 1615765 | 38715.8 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
