Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospho-n-acetylmuramoyl-pentapeptide- transferase | ALFI_RS07055 | Not Available | Positive | 1592075 - 1593319 | 45846.4 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | ALFI_RS07060 | Not Available | Positive | 1593322 - 1594671 | 48885.5 |
| ftsw/roda/spove family cell cycle protein | ALFI_RS07065 | Not Available | Positive | 1594676 - 1596136 | 53608.6 |
| rna-binding s4 domain-containing protein | ALFI_RS07070 | Not Available | Positive | 1596143 - 1596535 | 15106.0 |
| aminoacyl-trna hydrolase | ALFI_RS07075 | Not Available | Negative | 1596826 - 1597389 | 20645.0 |
| 50s ribosomal protein l25/general stress protein ctc | ALFI_RS07080 | Not Available | Negative | 1597400 - 1597969 | 20520.0 |
| rna polymerase sigma factor | ALFI_RS07090 | Not Available | Positive | 1598176 - 1598736 | 21424.7 |
| hypothetical protein | ALFI_RS07095 | Not Available | Positive | 1598733 - 1599056 | 12146.5 |
| gin domain-containing protein | ALFI_RS07100 | Not Available | Positive | 1599070 - 1600737 | 58821.0 |
| 2-isopropylmalate synthase | ALFI_RS07105 | Not Available | Positive | 1601082 - 1602602 | 55195.2 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
