Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clp protease clpp | ALFI_RS06960 | Not Available | Positive | 1572386 - 1573267 | 31870.4 |
| hypothetical protein | ALFI_RS06965 | Not Available | Positive | 1573334 - 1574311 | 36126.5 |
| hypothetical protein | ALFI_RS06970 | Not Available | Positive | 1574314 - 1574811 | 17354.7 |
| phage portal protein | ALFI_RS06975 | Not Available | Positive | 1574808 - 1576040 | 46276.4 |
| hypothetical protein | ALFI_RS06980 | Not Available | Positive | 1576283 - 1576756 | 17250.6 |
| phage holin family protein | ALFI_RS06985 | Not Available | Positive | 1576731 - 1577156 | 15765.3 |
| hypothetical protein | ALFI_RS06990 | Not Available | Positive | 1577149 - 1577550 | 15260.2 |
| comec/rec2 family competence protein | ALFI_RS06995 | Not Available | Positive | 1577642 - 1579120 | 52171.1 |
| thump-like domain-containing protein | ALFI_RS07000 | Not Available | Positive | 1579117 - 1580265 | 42081.5 |
| yhjd/yihy/brkb family envelope integrity protein | ALFI_RS07005 | Not Available | Positive | 1580340 - 1581644 | 49143.2 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
