Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane beta-barrel protein | ALFI_RS06865 | Not Available | Negative | 1548897 - 1549703 | 30630.4 |
| ig-like domain-containing protein | ALFI_RS06870 | Not Available | Negative | 1549708 - 1551783 | 79151.8 |
| hypothetical protein | ALFI_RS06875 | Not Available | Negative | 1551786 - 1552751 | 36248.8 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | ALFI_RS06880 | Not Available | Negative | 1552761 - 1553252 | 18242.9 |
| atp-binding protein | ALFI_RS06885 | Not Available | Negative | 1553256 - 1554401 | 42795.6 |
| hypothetical protein | ALFI_RS06890 | Not Available | Negative | 1554408 - 1554593 | 6426.3 |
| lipopolysaccharide biosynthesis protein | ALFI_RS06895 | Not Available | Negative | 1554610 - 1556079 | 54149.3 |
| duf3575 domain-containing protein | ALFI_RS06900 | Not Available | Positive | 1556882 - 1557463 | 21919.3 |
| duf3868 domain-containing protein | ALFI_RS06905 | Not Available | Positive | 1557476 - 1558894 | 53522.3 |
| hypothetical protein | ALFI_RS16520 | Not Available | Positive | 1558914 - 1560173 | 46721.0 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
