Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacon domain-containing protein | ALFI_RS06815 | Not Available | Negative | 1534774 - 1536084 | 46354.9 |
| ragb/susd family nutrient uptake outer membrane protein | ALFI_RS06820 | Not Available | Negative | 1536113 - 1537900 | 67853.5 |
| susc/raga family tonb-linked outer membrane protein | ALFI_RS06825 | Not Available | Negative | 1537920 - 1541477 | 131869.0 |
| fecr family protein | ALFI_RS06830 | Not Available | Negative | 1541603 - 1542601 | 36946.9 |
| rna polymerase sigma-70 factor | ALFI_RS06835 | Not Available | Negative | 1542672 - 1543265 | 22426.7 |
| glycoside hydrolase family 2 protein | ALFI_RS06840 | Not Available | Positive | 1543501 - 1545321 | 69062.0 |
| amidohydrolase family protein | ALFI_RS06845 | Not Available | Negative | 1545381 - 1546529 | 42269.8 |
| hypothetical protein | ALFI_RS06850 | Not Available | Negative | 1546489 - 1547316 | 31866.1 |
| abc transporter permease | ALFI_RS06855 | Not Available | Negative | 1547313 - 1548524 | 43669.4 |
| 30s ribosome-binding factor rbfa | ALFI_RS06860 | Not Available | Negative | 1548543 - 1548884 | 12997.6 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
