Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALFI_RS06765 | Not Available | Negative | 1523760 - 1524680 | 34717.5 |
| upxy family transcription antiterminator | ALFI_RS06770 | Not Available | Negative | 1524730 - 1525278 | 20825.4 |
| tyrosine-type recombinase/integrase | ALFI_RS06775 | Not Available | Negative | 1525741 - 1526952 | 45798.5 |
| yeih family protein | ALFI_RS06780 | Not Available | Negative | 1527186 - 1528472 | 46241.0 |
| porin | ALFI_RS06785 | Not Available | Negative | 1528494 - 1529540 | 38875.4 |
| hypothetical protein | ALFI_RS06790 | Not Available | Negative | 1530275 - 1530685 | 15285.6 |
| dna repair protein reco | ALFI_RS06795 | Not Available | Negative | 1530717 - 1531445 | 27859.7 |
| 50s ribosomal protein l11 methyltransferase | ALFI_RS06800 | Not Available | Negative | 1531447 - 1532274 | 29681.4 |
| site-specific tyrosine recombinase xerd | ALFI_RS06805 | Not Available | Positive | 1532344 - 1533240 | 34623.6 |
| ig domain-containing protein | ALFI_RS06810 | Not Available | Negative | 1533410 - 1534756 | 48001.2 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
