Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | ALFI_RS06620 | Not Available | Positive | 1493814 - 1494053 | 9213.06 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | ALFI_RS06625 | Not Available | Negative | 1494079 - 1494702 | 23562.5 |
| rna polymerase sigma factor | ALFI_RS06630 | Not Available | Negative | 1494730 - 1495293 | 22214.3 |
| glycosyltransferase | ALFI_RS06635 | Not Available | Negative | 1495284 - 1496438 | 44531.6 |
| trna guanosine(34) transglycosylase tgt | ALFI_RS06640 | Not Available | Positive | 1496530 - 1497660 | 42203.8 |
| lptf/lptg family permease | ALFI_RS06645 | Not Available | Positive | 1497667 - 1498770 | 42585.0 |
| aminofutalosine synthase mqne | ALFI_RS06650 | Not Available | Positive | 1498772 - 1499854 | 41003.1 |
| pasta domain-containing protein | ALFI_RS06655 | Not Available | Positive | 1499912 - 1500877 | 35773.0 |
| rlua family pseudouridine synthase | ALFI_RS06660 | Not Available | Positive | 1500877 - 1501965 | 41042.6 |
| ygiq family radical sam protein | ALFI_RS06665 | Not Available | Positive | 1502231 - 1504087 | 70479.6 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
