Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | ALFI_RS06525 | Not Available | Positive | 1475332 - 1476210 | 32053.5 |
| hypothetical protein | ALFI_RS06530 | Not Available | Positive | 1476342 - 1476812 | 17710.8 |
| s41 family peptidase | ALFI_RS06535 | Not Available | Positive | 1476805 - 1478469 | 61591.2 |
| sensor histidine kinase | ALFI_RS06540 | Not Available | Positive | 1478479 - 1479657 | 44903.5 |
| duf4271 domain-containing protein | ALFI_RS06545 | Not Available | Positive | 1479654 - 1480805 | 40195.0 |
| uroporphyrinogen-iii synthase | ALFI_RS06550 | Not Available | Positive | 1480860 - 1481702 | 31583.4 |
| ribonuclease p protein component | ALFI_RS06555 | Not Available | Positive | 1481710 - 1482078 | 14293.4 |
| membrane protein insertion efficiency factor yidd | ALFI_RS06560 | Not Available | Positive | 1482035 - 1482295 | 9859.17 |
| cation diffusion facilitator family transporter | ALFI_RS06565 | Not Available | Negative | 1482517 - 1483407 | 31616.5 |
| response regulator transcription factor | ALFI_RS06570 | Not Available | Negative | 1483414 - 1484019 | 22087.1 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
