Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | ALFI_RS06475 | Not Available | Positive | 1461559 - 1463625 | 77820.6 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | ALFI_RS06480 | Not Available | Positive | 1463656 - 1465242 | 59373.9 |
| glycoside hydrolase family 18 | ALFI_RS06485 | Not Available | Positive | 1465296 - 1466426 | 42396.6 |
| bt_3987 domain-containing protein | ALFI_RS06490 | Not Available | Positive | 1466445 - 1467758 | 47766.3 |
| family 20 glycosylhydrolase | ALFI_RS06495 | Not Available | Positive | 1467843 - 1470149 | 85662.4 |
| multidrug dmt transporter permease | ALFI_RS06500 | Not Available | Positive | 1470154 - 1471740 | 60104.5 |
| sulfatase | ALFI_RS06505 | Not Available | Positive | 1471769 - 1473172 | 51881.5 |
| duf3467 domain-containing protein | ALFI_RS06510 | Not Available | Negative | 1473449 - 1473754 | 11095.4 |
| lyse family translocator | ALFI_RS06515 | Not Available | Positive | 1473948 - 1474625 | 24703.9 |
| (d)cmp kinase | ALFI_RS06520 | Not Available | Positive | 1474612 - 1475310 | 25943.3 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
