Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | ALFI_RS06430 | Not Available | Positive | 1449215 - 1450393 | 43582.5 |
| endonuclease/exonuclease/phosphatase family protein | ALFI_RS06435 | Not Available | Negative | 1450619 - 1451665 | 39065.3 |
| udp-glucuronic acid decarboxylase family protein | ALFI_RS06440 | Not Available | Positive | 1451762 - 1452721 | 36138.6 |
| alpha/beta hydrolase | ALFI_RS06445 | Not Available | Negative | 1452939 - 1453850 | 33155.7 |
| gfo/idh/moca family protein | ALFI_RS06450 | Not Available | Negative | 1453884 - 1455281 | 52159.2 |
| apolipoprotein n-acyltransferase | ALFI_RS06455 | Not Available | Positive | 1455377 - 1456963 | 59045.9 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | ALFI_RS06460 | Not Available | Positive | 1456979 - 1458268 | 47174.5 |
| sigma-70 family rna polymerase sigma factor | ALFI_RS06465 | Not Available | Positive | 1458517 - 1459122 | 23319.1 |
| fecr family protein | ALFI_RS06470 | Not Available | Positive | 1459215 - 1460159 | 35736.8 |
| susc/raga family tonb-linked outer membrane protein | ALFI_RS17395 | Not Available | Positive | 1460328 - 1461503 | 41242.1 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
