Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna recognition motif domain-containing protein | ALFI_RS06330 | Not Available | Positive | 1423403 - 1423729 | 11619.5 |
| efflux transporter outer membrane subunit | ALFI_RS06335 | Not Available | Negative | 1423981 - 1425357 | 51057.0 |
| efflux rnd transporter permease subunit | ALFI_RS06340 | Not Available | Negative | 1425354 - 1428449 | 112282.0 |
| efflux rnd transporter periplasmic adaptor subunit | ALFI_RS06345 | Not Available | Negative | 1428453 - 1429703 | 46015.5 |
| atp-binding protein | ALFI_RS06350 | Not Available | Negative | 1430069 - 1432066 | 73978.3 |
| response regulator | ALFI_RS06355 | Not Available | Negative | 1432078 - 1432470 | 14938.0 |
| pled family two-component system response regulator | ALFI_RS06360 | Not Available | Positive | 1432823 - 1433191 | 14384.6 |
| sugar transferase | ALFI_RS06365 | Not Available | Positive | 1433188 - 1434354 | 44521.8 |
| tolc family protein | ALFI_RS06370 | Not Available | Positive | 1434366 - 1435166 | 30868.3 |
| gumc family protein | ALFI_RS06375 | Not Available | Positive | 1435170 - 1437377 | 84345.8 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
