Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4924 family protein | ALFI_RS06280 | Not Available | Positive | 1415706 - 1416272 | 21647.2 |
| gnat family n-acetyltransferase | ALFI_RS06285 | Not Available | Negative | 1416426 - 1416923 | 19301.4 |
| 50s ribosomal protein l34 | ALFI_RS06290 | Not Available | Negative | 1417070 - 1417231 | 6269.68 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | ALFI_RS06295 | Not Available | Positive | 1417475 - 1418791 | 48603.4 |
| thymidine kinase | ALFI_RS06300 | Not Available | Positive | 1418820 - 1419401 | 21825.3 |
| fadr/gntr family transcriptional regulator | ALFI_RS06305 | Not Available | Positive | 1419437 - 1420153 | 27343.3 |
| hypothetical protein | ALFI_RS06310 | Not Available | Negative | 1420258 - 1420950 | 26708.2 |
| carbon starvation protein a | ALFI_RS06315 | Not Available | Negative | 1420931 - 1422400 | 52759.2 |
| Trna-thr | Not Available | Not Available | Positive | 1422520 - 1422592 | Not Available |
| cold-shock protein | ALFI_RS06325 | Not Available | Positive | 1422934 - 1423371 | 16256.2 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
