Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALFI_RS06075 | Not Available | Negative | 1361891 - 1365169 | 118410.0 |
| helix-turn-helix domain-containing protein | ALFI_RS06080 | Not Available | Positive | 1365512 - 1365730 | 8494.4 |
| cvpa family protein | ALFI_RS06085 | Not Available | Positive | 1365848 - 1366351 | 18250.7 |
| ribosome small subunit-dependent gtpase a | ALFI_RS06090 | Not Available | Positive | 1366355 - 1367275 | 33862.3 |
| trmh family rna methyltransferase | ALFI_RS06095 | Not Available | Positive | 1367256 - 1367939 | 25569.6 |
| aspartate aminotransferase family protein | ALFI_RS06100 | Not Available | Positive | 1367942 - 1369144 | 43693.9 |
| deoxyribonuclease iv | ALFI_RS06105 | Not Available | Negative | 1369278 - 1370126 | 31261.2 |
| duf3078 domain-containing protein | ALFI_RS06110 | Not Available | Positive | 1370222 - 1371466 | 47539.4 |
| s41 family peptidase | ALFI_RS06115 | Not Available | Positive | 1371510 - 1373147 | 60249.9 |
| hypothetical protein | ALFI_RS06120 | Not Available | Positive | 1373140 - 1373364 | 8131.96 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
