Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tlpa family protein disulfide reductase | ALFI_RS06020 | Not Available | Positive | 1346622 - 1347188 | 20860.2 |
| ribosome recycling factor | ALFI_RS06025 | Not Available | Positive | 1347191 - 1347748 | 20608.8 |
| duf3575 domain-containing protein | ALFI_RS06030 | Not Available | Positive | 1347837 - 1348487 | 25093.4 |
| phosphoenolpyruvate carboxykinase (atp) | ALFI_RS06035 | Not Available | Negative | 1348886 - 1350493 | 59785.6 |
| radical sam family heme chaperone hemw | ALFI_RS06045 | Not Available | Positive | 1350874 - 1351986 | 40917.1 |
| alpha-glucan family phosphorylase | ALFI_RS06050 | Not Available | Positive | 1352140 - 1356390 | 161512.0 |
| glycogen debranching enzyme n-terminal domain-containing protein | ALFI_RS06055 | Not Available | Positive | 1356501 - 1358648 | 80004.2 |
| glycosyltransferase family 4 protein | ALFI_RS06060 | Not Available | Positive | 1358676 - 1359989 | 48645.2 |
| glycoside hydrolase family 57 protein | ALFI_RS06065 | Not Available | Positive | 1360005 - 1361219 | 46599.6 |
| hypothetical protein | ALFI_RS06070 | Not Available | Positive | 1361526 - 1361825 | 10595.6 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
