Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | ALFI_RS00345 | Not Available | Positive | 69882 - 73235 | 123334.0 |
| ragb/susd family nutrient uptake outer membrane protein | ALFI_RS00350 | Not Available | Positive | 73253 - 74842 | 58407.4 |
| glycoside hydrolase family 18 | ALFI_RS00355 | Not Available | Positive | 74871 - 75962 | 40717.8 |
| duf1735 and lamg domain-containing protein | ALFI_RS00360 | Not Available | Positive | 75992 - 77158 | 42652.6 |
| duf1573 domain-containing protein | ALFI_RS00365 | Not Available | Negative | 77235 - 78389 | 41278.5 |
| rna polymerase sigma-70 factor | ALFI_RS00370 | Not Available | Negative | 78540 - 79124 | 22952.0 |
| fecr domain-containing protein | ALFI_RS00375 | Not Available | Positive | 79246 - 80256 | 38274.7 |
| susc/raga family tonb-linked outer membrane protein | ALFI_RS00380 | Not Available | Positive | 80438 - 83800 | 122472.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | ALFI_RS00385 | Not Available | Positive | 83819 - 85435 | 59175.0 |
| glycoside hydrolase family 18 | ALFI_RS00390 | Not Available | Positive | 85455 - 86438 | 37183.6 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
