Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | ALFI_RS05930 | Not Available | Negative | 1329341 - 1330351 | 35502.5 |
| arac family transcriptional regulator | ALFI_RS05935 | Not Available | Positive | 1330504 - 1331421 | 34915.8 |
| helix-turn-helix domain-containing protein | ALFI_RS05940 | Not Available | Negative | 1331445 - 1332338 | 34222.9 |
| alpha/beta hydrolase | ALFI_RS05945 | Not Available | Positive | 1332574 - 1333596 | 37565.4 |
| multidrug dmt transporter permease | ALFI_RS17385 | Not Available | Positive | 1333609 - 1333836 | 8048.16 |
| gh36 c-terminal domain-containing protein | ALFI_RS17390 | Not Available | Positive | 1333813 - 1334085 | 10226.3 |
| hypothetical protein | ALFI_RS05955 | Not Available | Positive | 1334259 - 1334516 | 10021.8 |
| hypothetical protein | ALFI_RS05960 | Not Available | Positive | 1334590 - 1334895 | 12463.1 |
| hypothetical protein | ALFI_RS05965 | Not Available | Negative | 1335028 - 1335540 | 19090.9 |
| helix-turn-helix domain-containing protein | ALFI_RS05975 | Not Available | Positive | 1336360 - 1336590 | 8879.87 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
