Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 1285894 - 1285965 | Not Available |
| lipopolysaccharide kinase inaa family protein | ALFI_RS05785 | Not Available | Positive | 1286292 - 1287068 | 30813.2 |
| prephenate dehydratase | ALFI_RS05790 | Not Available | Positive | 1287287 - 1288132 | 31077.2 |
| bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type ii | ALFI_RS05795 | Not Available | Positive | 1288257 - 1289321 | 39785.2 |
| response regulator transcription factor | ALFI_RS05800 | Not Available | Positive | 1289415 - 1290095 | 25534.9 |
| sensor histidine kinase | ALFI_RS05805 | Not Available | Positive | 1290073 - 1291521 | 54435.2 |
| inorganic phosphate transporter | ALFI_RS05810 | Not Available | Positive | 1291722 - 1293941 | 81584.7 |
| hypothetical protein | ALFI_RS05815 | Not Available | Negative | 1294120 - 1294434 | 10530.1 |
| hypothetical protein | ALFI_RS05820 | Not Available | Negative | 1294383 - 1295252 | 31394.2 |
| fimbrillin family protein | ALFI_RS05825 | Not Available | Negative | 1295262 - 1295918 | 23623.6 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
