Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination mediator recr | ALFI_RS05730 | Not Available | Negative | 1273534 - 1274130 | 22237.9 |
| tetratricopeptide repeat protein | ALFI_RS05735 | Not Available | Negative | 1274131 - 1274949 | 30479.7 |
| batd family protein | ALFI_RS05740 | Not Available | Negative | 1274958 - 1276814 | 67986.3 |
| fumarate hydratase | ALFI_RS05745 | Not Available | Negative | 1276891 - 1278504 | 58950.7 |
| class ii fructose-bisphosphate aldolase | ALFI_RS05750 | Not Available | Positive | 1278799 - 1279791 | 35989.2 |
| is110 family transposase | ALFI_RS05755 | Not Available | Negative | 1280175 - 1281143 | 35640.4 |
| hypothetical protein | ALFI_RS05760 | Not Available | Positive | 1281358 - 1282347 | 35156.5 |
| hypothetical protein | ALFI_RS05765 | Not Available | Positive | 1282369 - 1283442 | 39312.3 |
| alpha/beta hydrolase | ALFI_RS05770 | Not Available | Negative | 1283775 - 1284728 | 36182.7 |
| nad-dependent epimerase/dehydratase family protein | ALFI_RS05775 | Not Available | Negative | 1284829 - 1285779 | 35214.3 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
