Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidylyltransferase domain-containing protein | ALFI_RS05630 | Not Available | Positive | 1248877 - 1249530 | 24893.6 |
| hypothetical protein | ALFI_RS05635 | Not Available | Negative | 1249613 - 1250497 | 33748.4 |
| glycosyltransferase family 2 protein | ALFI_RS05640 | Not Available | Positive | 1250684 - 1251613 | 33947.5 |
| alpha/beta hydrolase family esterase | ALFI_RS05645 | Not Available | Positive | 1251631 - 1252527 | 32692.2 |
| atp-dependent chaperone clpb | ALFI_RS05650 | Not Available | Negative | 1252670 - 1255267 | 97329.6 |
| dna polymerase iii subunit gamma/tau | ALFI_RS16490 | Not Available | Positive | 1255607 - 1257910 | 80854.0 |
| tyrosine--trna ligase | ALFI_RS05660 | Not Available | Positive | 1258042 - 1259340 | 48526.5 |
| dihydroneopterin aldolase | ALFI_RS05665 | Not Available | Positive | 1259342 - 1259695 | 13413.5 |
| sodium-dependent transporter | ALFI_RS05670 | Not Available | Positive | 1259748 - 1261097 | 48907.6 |
| calcineurin-like phosphoesterase c-terminal domain-containing protein | ALFI_RS05675 | Not Available | Positive | 1261149 - 1262573 | 53494.3 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
