Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | ALFI_RS05580 | Not Available | Positive | 1237919 - 1238776 | 31133.8 |
| wg repeat-containing protein | ALFI_RS05585 | Not Available | Positive | 1238779 - 1239801 | 38824.2 |
| thioredoxin-disulfide reductase | ALFI_RS05590 | Not Available | Positive | 1239824 - 1240756 | 33400.8 |
| ribonuclease z | ALFI_RS05595 | Not Available | Positive | 1240795 - 1241718 | 34014.8 |
| rna methyltransferase | ALFI_RS05600 | Not Available | Positive | 1241715 - 1242470 | 26898.6 |
| hypothetical protein | ALFI_RS05605 | Not Available | Negative | 1242776 - 1243138 | 13403.2 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | ALFI_RS05610 | Not Available | Positive | 1243496 - 1244590 | 39373.8 |
| threonine--trna ligase | ALFI_RS05615 | Not Available | Positive | 1244816 - 1246768 | 74394.8 |
| multidrug dmt transporter permease | ALFI_RS05620 | Not Available | Positive | 1247008 - 1247529 | 20011.6 |
| acyltransferase | ALFI_RS05625 | Not Available | Positive | 1247858 - 1248823 | 35731.5 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
