Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| family 20 glycosylhydrolase | ALFI_RS00295 | Not Available | Negative | 54602 - 56896 | 85920.7 |
| sulfatase | ALFI_RS00300 | Not Available | Negative | 56911 - 58485 | 60892.0 |
| bt_3987 domain-containing protein | ALFI_RS00305 | Not Available | Negative | 58592 - 59833 | 45523.8 |
| glycoside hydrolase family 18 | ALFI_RS00310 | Not Available | Negative | 59851 - 60996 | 42153.5 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | ALFI_RS00315 | Not Available | Negative | 61026 - 62603 | 58737.7 |
| susc/raga family tonb-linked outer membrane protein | ALFI_RS00320 | Not Available | Negative | 62617 - 65793 | 117411.0 |
| fecr family protein | ALFI_RS00325 | Not Available | Negative | 66111 - 67046 | 35644.3 |
| rna polymerase sigma-70 factor | ALFI_RS00330 | Not Available | Negative | 67133 - 67732 | 23272.2 |
| rna polymerase sigma-70 factor | ALFI_RS00335 | Not Available | Positive | 68161 - 68733 | 21581.9 |
| fecr family protein | ALFI_RS00340 | Not Available | Positive | 68809 - 69711 | 34361.3 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
