Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | ALFI_RS05425 | Not Available | Negative | 1201996 - 1202607 | 23574.6 |
| family 20 glycosylhydrolase | ALFI_RS05430 | Not Available | Negative | 1202622 - 1204946 | 85581.5 |
| l-aspartate oxidase | ALFI_RS05435 | Not Available | Positive | 1205136 - 1206695 | 58032.5 |
| peptide chain release factor 3 | ALFI_RS05440 | Not Available | Positive | 1206760 - 1208343 | 59012.6 |
| pirin family protein | ALFI_RS05445 | Not Available | Negative | 1208526 - 1209242 | 26436.2 |
| acyltransferase family protein | ALFI_RS05450 | Not Available | Negative | 1209339 - 1210439 | 39444.9 |
| kama family radical sam protein | ALFI_RS05455 | Not Available | Negative | 1210612 - 1212708 | 80585.7 |
| Trna-pro | Not Available | Not Available | Positive | 1213150 - 1213227 | Not Available |
| abc transporter substrate-binding protein | ALFI_RS05465 | Not Available | Positive | 1213308 - 1214462 | 41977.2 |
| iron abc transporter permease | ALFI_RS05470 | Not Available | Positive | 1214480 - 1215487 | 34714.3 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
