Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | ALFI_RS05375 | Not Available | Positive | 1188305 - 1189198 | 32534.0 |
| bt_3987 domain-containing protein | ALFI_RS05380 | Not Available | Positive | 1189230 - 1190291 | 39419.7 |
| rna polymerase sigma-70 factor | ALFI_RS05385 | Not Available | Positive | 1190570 - 1191034 | 17980.7 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | ALFI_RS05390 | Not Available | Negative | 1191157 - 1192368 | 45923.0 |
| duf4999 domain-containing protein | ALFI_RS05395 | Not Available | Negative | 1192518 - 1193477 | 34453.8 |
| duf1735 and lamg domain-containing protein | ALFI_RS05400 | Not Available | Negative | 1193562 - 1194731 | 41842.8 |
| glycoside hydrolase family 18 | ALFI_RS05405 | Not Available | Negative | 1194758 - 1195879 | 42059.4 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | ALFI_RS05410 | Not Available | Negative | 1195908 - 1197434 | 56281.8 |
| susc/raga family tonb-linked outer membrane protein | ALFI_RS05415 | Not Available | Negative | 1197448 - 1200744 | 122171.0 |
| fecr family protein | ALFI_RS05420 | Not Available | Negative | 1200921 - 1201889 | 36047.4 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
