Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALFI_RS05125 | Not Available | Negative | 1114168 - 1114821 | 25837.4 |
| hypothetical protein | ALFI_RS05130 | Not Available | Negative | 1114818 - 1115018 | 7615.15 |
| hypothetical protein | ALFI_RS05135 | Not Available | Negative | 1115299 - 1115640 | 13690.0 |
| helix-turn-helix domain-containing protein | ALFI_RS16485 | Not Available | Negative | 1115652 - 1115951 | 11986.8 |
| nucleoside hydrolase | ALFI_RS05145 | Not Available | Negative | 1116913 - 1118391 | 53199.6 |
| tonb-dependent receptor | ALFI_RS05150 | Not Available | Negative | 1118406 - 1120292 | 69493.9 |
| mfs transporter | ALFI_RS05155 | Not Available | Positive | 1120480 - 1122444 | 71590.6 |
| energy-coupling factor abc transporter atp-binding protein | ALFI_RS05160 | Not Available | Negative | 1122448 - 1123209 | 28178.4 |
| cobalt ecf transporter t component cbiq | ALFI_RS05165 | Not Available | Negative | 1123211 - 1124026 | 30700.6 |
| energy-coupling factor abc transporter permease | ALFI_RS05170 | Not Available | Negative | 1124023 - 1125015 | 34550.9 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
