Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system pard family antitoxin | ALFI_RS05030 | Not Available | Negative | 1102319 - 1102564 | 9011.72 |
| duf4120 family protein | ALFI_RS16480 | Not Available | Negative | 1102669 - 1102959 | 11414.6 |
| hypothetical protein | ALFI_RS05040 | Not Available | Negative | 1102977 - 1103612 | 24681.0 |
| duf4121 family protein | ALFI_RS05045 | Not Available | Negative | 1103762 - 1104661 | 34048.1 |
| ardc family protein | ALFI_RS05050 | Not Available | Negative | 1104730 - 1105719 | 37694.2 |
| hypothetical protein | ALFI_RS05055 | Not Available | Negative | 1105736 - 1106167 | 16586.0 |
| parb/repb/spo0j family partition protein | ALFI_RS05060 | Not Available | Negative | 1106239 - 1108311 | 78207.2 |
| hypothetical protein | ALFI_RS16890 | Not Available | Negative | 1108411 - 1108755 | 12443.9 |
| hypothetical protein | ALFI_RS05070 | Not Available | Positive | 1109826 - 1110167 | 13503.1 |
| histone h1 | ALFI_RS05075 | Not Available | Positive | 1110359 - 1110535 | 6422.83 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
