Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3440 domain-containing protein | ALFI_RS04980 | Not Available | Positive | 1090940 - 1092256 | 51908.0 |
| ibrb-like domain-containing protein | ALFI_RS04985 | Not Available | Positive | 1092201 - 1092764 | 21927.2 |
| multidrug dmt transporter permease | ALFI_RS17685 | Not Available | Positive | 1092901 - 1093107 | 7621.29 |
| hypothetical protein | ALFI_RS04990 | Not Available | Negative | 1093013 - 1093447 | 17307.0 |
| hypothetical protein | ALFI_RS05000 | Not Available | Positive | 1094506 - 1094895 | 15690.3 |
| sos response-associated peptidase | ALFI_RS05005 | Not Available | Negative | 1094976 - 1095797 | 31342.4 |
| y-family dna polymerase | ALFI_RS05010 | Not Available | Negative | 1095819 - 1097144 | 50098.6 |
| s24 family peptidase | ALFI_RS05015 | Not Available | Negative | 1097141 - 1098025 | 33103.8 |
| atp-binding protein | ALFI_RS05020 | Not Available | Positive | 1098615 - 1100543 | 73779.2 |
| yhcg family protein | ALFI_RS05025 | Not Available | Positive | 1100589 - 1101602 | 39704.2 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
