Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia isoporae |
| Strain | DSM 26433 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920505 bp
Thymine Count
914254 bp
Guanine Count
1190771 bp
Cytosine Count
1207235 bp
Genome Length
4232765 bp
Protein-coding Genes
4082 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BXY66_0942 | Not Available | Positive | 936629 - 937642 | 38026.1 |
| hypothetical protein | BXY66_0943 | Not Available | Positive | 937599 - 938054 | 16626.2 |
| exopolyphosphatase/guanosine-5'-triphosphate, 3'-diphosphate pyrophosphatase | BXY66_0944 | Not Available | Negative | 938086 - 939636 | 57788.9 |
| polyphosphate kinase | BXY66_0945 | Not Available | Negative | 939700 - 941874 | 81757.1 |
| hypothetical protein | BXY66_0946 | Not Available | Negative | 942249 - 942914 | 23850.9 |
| putative purr-regulated permease perm | BXY66_0947 | Not Available | Negative | 942918 - 944006 | 38698.5 |
| hypothetical protein | BXY66_0948 | Not Available | Negative | 944088 - 945824 | 62603.6 |
| prolyl-trna synthetase | BXY66_0949 | Not Available | Positive | 946121 - 947473 | 50872.5 |
| hypothetical protein | BXY66_0950 | Not Available | Positive | 947631 - 947894 | 9397.36 |
| hypothetical protein | BXY66_0951 | Not Available | Negative | 947947 - 948348 | 14894.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
