Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia isoporae |
| Strain | DSM 26433 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920505 bp
Thymine Count
914254 bp
Guanine Count
1190771 bp
Cytosine Count
1207235 bp
Genome Length
4232765 bp
Protein-coding Genes
4082 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BXY66_0922 | Not Available | Positive | 919355 - 919594 | 9227.95 |
| hypothetical protein | BXY66_0923 | Not Available | Negative | 919576 - 920415 | 29846.8 |
| hypothetical protein | BXY66_0924 | Not Available | Negative | 920415 - 921815 | 51666.3 |
| dha1 family bicyclomycin/chloramphenicol resistance-like mfs transporter | BXY66_0925 | Not Available | Negative | 922004 - 923218 | 42422.8 |
| propionyl-coa carboxylase carboxyltransferase subunit | BXY66_0926 | Not Available | Positive | 923396 - 924928 | 56242.2 |
| cupin domain-containing protein | BXY66_0927 | Not Available | Positive | 924990 - 925391 | 15042.7 |
| hypothetical protein | BXY66_0928 | Not Available | Positive | 925388 - 925741 | 12730.3 |
| hypothetical protein | BXY66_0929 | Not Available | Positive | 925738 - 926145 | 15178.0 |
| hypothetical protein | BXY66_0930 | Not Available | Positive | 926348 - 926494 | 5030.07 |
| hypothetical protein | BXY66_0931 | Not Available | Positive | 926585 - 926950 | 13753.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
