Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia isoporae |
| Strain | DSM 26433 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920505 bp
Thymine Count
914254 bp
Guanine Count
1190771 bp
Cytosine Count
1207235 bp
Genome Length
4232765 bp
Protein-coding Genes
4082 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fur family iron response transcriptional regulator | BXY66_0761 | Not Available | Positive | 747138 - 747554 | 15306.9 |
| nadph2:quinone reductase | BXY66_0762 | Not Available | Positive | 747645 - 748637 | 34091.4 |
| putative cardiolipin synthase | BXY66_0763 | Not Available | Negative | 748644 - 750179 | 56381.1 |
| hypothetical protein | BXY66_0764 | Not Available | Negative | 750170 - 751102 | 36029.5 |
| pp_00759 | BXY66_0765 | Not Available | Positive | 751163 - 752512 | Not Available |
| ompa family protein | BXY66_0766 | Not Available | Positive | 752742 - 753317 | 20883.8 |
| hypothetical protein | BXY66_0767 | Not Available | Positive | 753329 - 753628 | 10642.7 |
| phosphate starvation-inducible protein phoh | BXY66_0768 | Not Available | Positive | 753794 - 754843 | 38340.4 |
| putative rrna maturation factor | BXY66_0769 | Not Available | Positive | 754898 - 755389 | 17595.6 |
| magnesium and cobalt transporter | BXY66_0770 | Not Available | Positive | 755420 - 756304 | 32145.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
