Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia isoporae |
| Strain | DSM 26433 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920505 bp
Thymine Count
914254 bp
Guanine Count
1190771 bp
Cytosine Count
1207235 bp
Genome Length
4232765 bp
Protein-coding Genes
4082 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multiple antibiotic resistance protein | BXY66_0661 | Not Available | Negative | 645897 - 646535 | 22737.4 |
| hypothetical protein | BXY66_0662 | Not Available | Positive | 646643 - 647170 | 19279.0 |
| ess family glutamate:na+ symporter | BXY66_0663 | Not Available | Positive | 647175 - 648386 | 42393.6 |
| glycyl-trna synthetase beta chain | BXY66_0664 | Not Available | Positive | 648396 - 650621 | 80696.7 |
| pyruvate phosphate dikinase | BXY66_0665 | Not Available | Positive | 650704 - 653244 | 91816.8 |
| cell wall hydrolase | BXY66_0666 | Not Available | Positive | 653395 - 654036 | 23557.2 |
| dihydroneopterin aldolase | BXY66_0667 | Not Available | Positive | 654180 - 655109 | 34000.7 |
| dihydropteroate synthase | BXY66_0668 | Not Available | Positive | 655148 - 656167 | 35648.4 |
| phosphoglucosamine mutase | BXY66_0669 | Not Available | Positive | 656157 - 657503 | 47506.0 |
| drug/metabolite transporter (dmt)-like permease | BXY66_0670 | Not Available | Negative | 657500 - 658414 | 32050.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
