Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia isoporae |
| Strain | DSM 26433 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920505 bp
Thymine Count
914254 bp
Guanine Count
1190771 bp
Cytosine Count
1207235 bp
Genome Length
4232765 bp
Protein-coding Genes
4082 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BXY66_0471 | Not Available | Negative | 463935 - 464612 | 26150.3 |
| tetr family transcriptional regulator | BXY66_0472 | Not Available | Negative | 464736 - 465353 | 23576.3 |
| tetr family transcriptional regulator | BXY66_0473 | Not Available | Negative | 465435 - 466043 | 22640.8 |
| n-carbamoyl-l-amino-acid hydrolase | BXY66_0474 | Not Available | Positive | 466241 - 467491 | 44856.2 |
| dihydropyrimidinase | BXY66_0475 | Not Available | Positive | 467592 - 469049 | 53104.9 |
| putative rmlc-like cupin family protein | BXY66_0476 | Not Available | Negative | 469060 - 469473 | 15138.1 |
| nitt/taut family transport system atp-binding protein | BXY66_0477 | Not Available | Positive | 469491 - 470309 | 30113.0 |
| ribosomal protein s18 acetylase rimi-like enzyme | BXY66_0478 | Not Available | Positive | 470302 - 470733 | 16279.4 |
| nitt/taut family transport system permease protein | BXY66_0479 | Not Available | Positive | 470730 - 471602 | 31133.2 |
| nitt/taut family transport system permease protein | BXY66_0480 | Not Available | Positive | 471602 - 472447 | 30616.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
