Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia isoporae |
| Strain | DSM 26433 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920505 bp
Thymine Count
914254 bp
Guanine Count
1190771 bp
Cytosine Count
1207235 bp
Genome Length
4232765 bp
Protein-coding Genes
4082 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BXY66_0451 | Not Available | Negative | 441636 - 443027 | 49001.1 |
| glutathione s-transferase | BXY66_0452 | Not Available | Positive | 443217 - 443975 | 27148.5 |
| nad+ synthase | BXY66_0453 | Not Available | Positive | 444055 - 445713 | 61280.2 |
| 6-phosphofructokinase | BXY66_0454 | Not Available | Negative | 445733 - 446686 | 32837.1 |
| magnesium transporter | BXY66_0455 | Not Available | Positive | 446878 - 448272 | 49938.7 |
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | BXY66_0456 | Not Available | Negative | 448315 - 449247 | 33027.1 |
| uncharacterized protein duf1801 | BXY66_0457 | Not Available | Positive | 449357 - 449785 | 15921.2 |
| hypothetical protein | BXY66_0458 | Not Available | Negative | 449854 - 450453 | 22355.2 |
| badm/rrf2 family transcriptional regulator | BXY66_0459 | Not Available | Positive | 450517 - 450963 | 16198.9 |
| hypothetical protein | BXY66_0460 | Not Available | Positive | 451145 - 451306 | 5975.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
