Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia isoporae |
| Strain | DSM 26433 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920505 bp
Thymine Count
914254 bp
Guanine Count
1190771 bp
Cytosine Count
1207235 bp
Genome Length
4232765 bp
Protein-coding Genes
4082 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna invertase pin-like site-specific dna recombinase | BXY66_0289 | Not Available | Negative | 277024 - 278703 | 61776.9 |
| protein of unknown function (duf2924) | BXY66_0290 | Not Available | Negative | 278700 - 279122 | 15358.5 |
| dna modification methylase | BXY66_0291 | Not Available | Positive | 279572 - 280966 | 50138.3 |
| hypothetical protein | BXY66_0292 | Not Available | Positive | 280959 - 281534 | 21051.2 |
| putative phage terminase large subunit-like protein | BXY66_0293 | Not Available | Positive | 281531 - 283009 | 55946.8 |
| hypothetical protein | BXY66_0294 | Not Available | Negative | 283094 - 283561 | 17690.3 |
| hypothetical protein | BXY66_0295 | Not Available | Positive | 283654 - 283914 | 9898.63 |
| hypothetical protein | BXY66_0296 | Not Available | Positive | 283991 - 284413 | 16007.3 |
| dna-binding transcriptional lysr family regulator | BXY66_0297 | Not Available | Negative | 284303 - 285235 | 33585.1 |
| hypothetical protein | BXY66_0298 | Not Available | Positive | 285387 - 286481 | 39232.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
