Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia isoporae |
| Strain | DSM 26433 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920505 bp
Thymine Count
914254 bp
Guanine Count
1190771 bp
Cytosine Count
1207235 bp
Genome Length
4232765 bp
Protein-coding Genes
4082 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BXY66_0159 | Not Available | Positive | 147902 - 149140 | 44442.6 |
| chemotaxis protein motb | BXY66_0160 | Not Available | Positive | 149144 - 151330 | 78026.6 |
| peptidase m23-like protein | BXY66_0161 | Not Available | Negative | 151337 - 152299 | 33937.9 |
| atp-dependent clp protease atp-binding subunit clpa | BXY66_0162 | Not Available | Negative | 152302 - 154632 | 85162.9 |
| hydroxyacylglutathione hydrolase | BXY66_0163 | Not Available | Negative | 154817 - 155584 | 27334.5 |
| hypothetical protein | BXY66_0164 | Not Available | Positive | 155647 - 156387 | 27069.9 |
| hypothetical protein | BXY66_0165 | Not Available | Negative | 156384 - 157811 | 50661.4 |
| hypothetical protein | BXY66_0166 | Not Available | Negative | 157931 - 159202 | 46160.6 |
| atp synthase f1 subcomplex delta subunit | BXY66_0167 | Not Available | Positive | 159612 - 160172 | 19555.9 |
| atp synthase f1 subcomplex alpha subunit | BXY66_0168 | Not Available | Positive | 160172 - 161710 | 54796.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
