Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia isoporae |
| Strain | DSM 26433 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920505 bp
Thymine Count
914254 bp
Guanine Count
1190771 bp
Cytosine Count
1207235 bp
Genome Length
4232765 bp
Protein-coding Genes
4082 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemerythrin hhe cation binding domain-containing protein | BXY66_0149 | Not Available | Positive | 139694 - 140386 | 25987.3 |
| ssu ribosomal protein s4p | BXY66_0150 | Not Available | Positive | 140585 - 141205 | 23639.5 |
| fkbm family methyltransferase | BXY66_0151 | Not Available | Negative | 141270 - 142061 | 29922.4 |
| hypothetical protein | BXY66_0152 | Not Available | Positive | 142279 - 142686 | 14149.8 |
| hypothetical protein | BXY66_0153 | Not Available | Negative | 142695 - 143078 | 13672.5 |
| histidinol-phosphate aminotransferase | BXY66_0154 | Not Available | Positive | 143249 - 144346 | 39378.0 |
| prephenate dehydrogenase | BXY66_0155 | Not Available | Positive | 144343 - 145266 | 32908.2 |
| hypothetical protein | BXY66_0156 | Not Available | Positive | 145263 - 146198 | 33006.0 |
| hypothetical protein | BXY66_0157 | Not Available | Negative | 146195 - 147202 | 36965.1 |
| cation transport protein chac | BXY66_0158 | Not Available | Positive | 147282 - 147806 | 19163.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
